API reference

This documents the application programming and command line interfaces of the PhasorPy library version 0.1.dev.

Note

The PhasorPy library is in its early stages of development. It is not nearly feature complete. Large, backwards-incompatible changes may occur between revisions.

• phasorpy
  • __version__
  • versions()
• phasorpy.phasor
  • lifetime_fraction_from_amplitude()
  • lifetime_fraction_to_amplitude()
  • lifetime_from_frequency()
  • lifetime_to_frequency()
  • lifetime_to_signal()
  • phasor_at_harmonic()
  • phasor_calibrate()
  • phasor_center()
  • phasor_divide()
  • phasor_filter()
  • phasor_from_apparent_lifetime()
  • phasor_from_fret_acceptor()
  • phasor_from_fret_donor()
  • phasor_from_lifetime()
  • phasor_from_polar()
  • phasor_from_signal()
  • phasor_multiply()
  • phasor_semicircle()
  • phasor_threshold()
  • phasor_to_apparent_lifetime()
  • phasor_to_complex()
  • phasor_to_polar()
  • phasor_to_principal_plane()
  • phasor_to_signal()
  • phasor_transform()
  • polar_from_apparent_lifetime()
  • polar_from_reference()
  • polar_from_reference_phasor()
  • polar_to_apparent_lifetime()
• phasorpy.cursors
  • mask_from_circular_cursor()
  • mask_from_elliptic_cursor()
  • mask_from_polar_cursor()
  • pseudo_color()
• phasorpy.components
  • graphical_component_analysis()
  • two_fractions_from_phasor()
• phasorpy.plot
  • PhasorPlot
    • PhasorPlot.ax
    • PhasorPlot.circle()
    • PhasorPlot.components()
    • PhasorPlot.contour()
    • PhasorPlot.cursor()
    • PhasorPlot.dataunit_to_point
    • PhasorPlot.fig
    • PhasorPlot.hist2d()
    • PhasorPlot.imshow()
    • PhasorPlot.line()
    • PhasorPlot.plot()
    • PhasorPlot.polar_cursor()
    • PhasorPlot.polar_grid()
    • PhasorPlot.save()
    • PhasorPlot.semicircle()
    • PhasorPlot.show()
  • PhasorPlotFret
  • plot_phasor()
  • plot_phasor_image()
  • plot_polar_frequency()
  • plot_signal_image()
• phasorpy.io
  • phasor_from_ometiff()
  • phasor_from_simfcs_referenced()
  • phasor_to_ometiff()
  • phasor_to_simfcs_referenced()
  • read_b64()
  • read_bh()
  • read_bhz()
  • read_fbd()
  • read_flif()
  • read_ifli()
  • read_lsm()
  • read_ptu()
  • read_sdt()
  • read_z64()
• phasorpy.color
  • float2int()
  • wavelength2rgb()
  • CATEGORICAL
  • SRGB_SPECTRUM
• phasorpy.datasets
  • fetch()
  • REPOSITORIES
• phasorpy.utils
  • number_threads()
• Command line interface
  • python -m phasorpy
    • fetch
    • fret
    • versions
• Private modules
  • phasorpy._utils
    • chunk_iter()
    • dilate_coordinates()
    • kwargs_notnone()
    • parse_harmonic()
    • parse_kwargs()
    • phasor_from_polar_scalar()
    • phasor_to_polar_scalar()
    • scale_matrix()
    • sort_coordinates()
    • update_kwargs()
  • phasorpy._phasorpy
    • _gaussian_signal()
    • _phasor_from_lifetime()
    • _phasor_from_signal()